Список литературы
- Eberhard S., Finazzi G., Wollman, F.-A. The dynamics of photosynthesis. Annu. Rev. Genet. 2008;42:463–515. doi: 10.1146/annurev.genet.42.110807.091452
- Loll B., Kern J., Saenger W., Zouni A., Biesiadka J. Towards complete cofactorarrangement in the 3.0 _A resolution structure of photosystem II. Nature. 2005;438:1040–1044. doi: 10.1038/nature04224
- Cordes M., Giese B. Electron transfer in peptides and proteins. Chem. Soc. Rev. 2009;38:892–901. doi: 10.1039/b805743p
- Verkhovskaya M.L., Belevich N., Euro L., Wikström M., Verkhofsky M. Real-timeelectron transfer in respiratory complex I. Proc. Natl. Acad. Sci. U.S.A. 2008;105(10):3763–3767. doi: 10.1073/pnas.0711249105
- Stubbe J., Nocera D.G., Yee C.S., Chang M.C.Y. Radical Initiation in the ClassI Ribonucleotide Reductase: Long-Range Proton-Coupled Electron Transfer. Chem. Rev. 2003;103(6):2167–2202. doi: 10.1021/cr020421u
- Heller A. Spiers Memorial Lecture. On the hypothesis of cathodic protection of genes. Faraday Discuss. 2000;116:1–13. doi: 10.1039/b006196o
- van Loon B., Markkanen E., Hubscher U. Oxygen as a friend and enemy: How to combat the mutational potential of 8-oxo-guanine. DNA Repair 2010;9:604–616. doi: 10.1016/j.dnarep.2010.03.004
- Kanvah S., Schuster G.B. The sacrificial role of easily oxidizable sites in the protection of DNA from damage. Nucl. Ac. Res. 2005;33(16):5133–5138. doi: 10.1093/nar/gki801
- Giese B., Carl B., Carl T., Carell T., Behrens C., Hennecke U., Schiemann O., Feresin E. Excess Electron Transport Through DNA: A Single Electron Repairs More than One UV-Induced Lesion. Angew. Chem. Int. Ed. 2004;43:1848–1851. doi: 10.1002/anie.200353264
- Chen F., Tao N.J. Electron Transport in Single Molecules: From Benzene to Graphene. Acc. Chem. Res. 2009;42:429–438. doi: 10.1021/ar800199a
- Liu L., Frisbie C.D. Length-Dependent Conductance of Conjugated Molecular WiresSynthesized by Stepwise _Click_ Chemistry. J. Am. Chem. Soc. 2010;132:8854–8855. doi: 10.1021/ja103239b
- Marcus R.A. On the Theory of Oxidation-Reduction Reactions Involving ElectronTransfer. I. J. Chem. Phys. 1956;24:966–978. doi: 10.1063/1.1742723
- Marcus R.A. Electrostatic Free Energy and Other Properties of States HavingNonequilibrium Polarization. I. J. Chem. Phys. 1956;24:979–989. doi: 10.1063/1.1742724
- McConnell H.M. Intramolecular Charge Transfer in Aromatic Free Radicals. J. Chem.Phys. 1961;35:508–515. doi: 10.1063/1.1731961
- Giese B., Wessely S. The Influence of Mismatches on Long-Distance Charge Transport through DNA. Angew. Chem., Int. Ed. 2000;39:3490–3491. doi: 10.1002/1521-3773(20001002)39:19<3490::AID-ANIE3490>3.0.CO;2-S
- Henderson P.T., Jones D., Hampikian G., Kan Y., Schuster G.B. Long-distance charge transport in duplex DNA: the phonon-assisted polaron-like hopping mechanism. Proc. Natl. Acad. Sci. USA. 1999;96:8353–8358. doi: 10.1073/pnas.96.15.8353
- Ly D., Sanii L., Schuster G.B. Mechanism of charge transport in DNA: internally-linked anthraquinone conjugates support phonon-assisted polaron hopping. J. Am. Chem. Soc. 1999;121:9400–9410. doi: 10.1021/ja991753s
- Murphy C.J., Arkin M.R., Jenkins Y., Ghatlia N.D., Bossmann S., Turro N.J., Barton J.K. Long Range Photoinduced Electron Transfer through a DNA Helix. Science. 1993;262(5136):1025–1029. doi: 10.1126/science.7802858
- Wan C., Fiebig T., Kelley S.O., Treadway C.R., Barton J.K., Zewail A.H. Femtosecond dynamics of DNA-mediated electron transfer. Proc. Natl. Acad. Sci. USA. 1999;96(11):014–6019. doi: 10.1073/pnas.96.11.6014
- Turro N.J., Barton J.K. Paradigms, supermolecules, electron transfer and chemistry at a distance. What's the problem? The science or the paradigm? J. Biol. Inorg. Chem. 1998;3:201–209. doi: 10.1007/s007750050222
- Elias B., Genereux J.C., Barton J.K. Ping-Pong Electron Transfer through DNA. Angew. Chem. Int. Ed. 2008;47:9067–9070. doi: 10.1002/anie.200803556
- Arikuma Y., Nakayama H., Morita T., Kimura S. Electron Hopping over 100 A Along an 𝛼 Helix. Angew. Chem. Int. Ed. 2010;49:1800–1804. doi: 10.1002/anie.200905621
- Nano A., Furst A.L., Hill M.G., Barton J.K. DNA Electrochemistry: Charge-Transport Pathways through DNA Films on Gold. J. Am. Chem. Soc. 2021;143:11631–11640. doi: 10.1021/jacs.1c04713
- Delaney S., Barton J.K. Long-Range DNA Charge Transport. J. Org. Chem. 2003;68(17):6475–6483. doi: 10.1021/jo030095y
- Genereux J.C., Barton J.K. Mechanisms for DNA Charge Transport. Chem. Rev. 2010;110(3):1642–1662. doi: 10.1021/cr900228f
- Astakhova T.Yu., Likhachev V. N., Vinogradov G.A. Long-range charge transfer in biopolymers. Russian Chemical Reviews. 2012;81(11):994–1010. doi: 10.1070/RC2012v081n11ABEH004308
- Arnold A.R., Grodick M.A., Barton J.K. DNA Charge Transport: from Chemical Principles to the Cell. Cell Chemical Biology. 2016;23:183–197. doi: 10.1016/j.chembiol.2015.11.010
- Diaz E., Lima R.P.A., Dominguez-Adame F. Bloch-like oscillations in the Peyrard-Bishop-Holstein model. Phys. Rev. B. 2008;78:134303. doi: 10.1103/PhysRevB.78.134303
- Maniadis P., Kalosakas G., Rasmussen K.O., Bishop A.R. ac conductivity in a DNA charge transport model. Phys. Rev. B. 2005;72. Article No. 021912. doi: 10.1103/PhysRevE.72.021912
- Lakhno V.D. Davydov's solitons in homogeneous nucleotide chain. International Journal of Quantum Chemistry. 2010;110:127–137. doi: 10.1002/qua.22264
- Basko D.M., Conwell E.M. Stationary Polaron Motion in a Polymer Chain at High Electric Fields. Phys. Rev. Lett. 2002;88(5). Article No. 056401. doi: 10.1103/PhysRevLett.88.056401
- Vinogradov G.A. Subsonic and supersonic polaron dynamics in polyacetylene. Synthetic Metals. 2023;299. Article No. 117477. doi: 10.1016/j.synthmet.2023.117477
- Lakhno V.D., Fialko N.S. Mechanism of soliton stopping in a molecular chain without dispersion. Computer Research and Modeling. 2009;1(1):93–99. doi: 10.20537/2076-7633-2009-1-1-93-99
- Lima R.P.A., Malyshev A.V. Charge transfer mechanisms in DNA at nite temperatures: From quasiballistic to anomalous subdi usive charge transfer. Phys. Rev. E. 2022;106. Article No. 024414. doi: 10.1103/PhysRevE.106.024414
- Lakhno V.D., Fialko N.S. Conditions for the Existence of Polaron States in Classical Molecular Chains at Finite Temperatures. Mathematical Biology and Bioinformatics. 2014;9(1). doi: 10.17537/2014.9.1
- Lakhno V.D., Fialko N.S. On the dynamics of a polaron in a classical chain with finite temperature. Journal of Experimental and Theoretical Physics. 2015;120:125–131. doi: 10.1134/S106377611501015X
- Fialko N. S., Sobolev E., Lakhno V. D. On the calculation of thermodynamic quantities in the Holstein model for homogeneous polynucleotides. Journal of Experimental and Theoretical Physics. 2017;124:635–642. doi: 10.1134/S1063776117040124
- Su W.P., Schrieffer J.R., Heeger A.J. Solitons in Polyacetylene. Phys. Rev. Lett. 1979;42:1698–1701. doi: 10.1103/PhysRevLett.42.1698
- Su W.P., Schrieffer J.R., Heeger A.J. Soliton excitations in polyacetylene. Phys. Rev. B. 1980;22(4):2099–2111. doi: 10.1103/PhysRevB.22.2099
- Sun S., Zhang Y., Liu X., An Z. J. Phys. Chem. 2019;123. doi: 10.1021/acs.jpcc.9b07330
- Berlin Y.A., Burin A.L., Ratner M.A. Elementary steps for charge transport in DNA: thermal activation vs. tunneling. Chem. Phys. 2002;275:61–74. doi: 10.1016/S0301-0104(01)00536-5
- Meng R., Yin S., Zheng Y., Yang L., Xie S., Saxena A. Phase-breaking e_ect on polaron transport in organic conjugated polymers. Org. Electron. 2017;49:33–38. doi: 10.1016/j.orgel.2017.06.026
- Conwell E.M., Basko D.M. Hole Traps in DNA. J. Amer. Chem. Soc. 2001;123(46). Article No. 11441. doi: 10.1021/ja015947v
- Conwell E.M., Rakhmanova S.V. Polarons in DNA. Proc. Natl. Acad. Sci. U.S.A. 2000;97:4556–4560. doi: 10.1073/pnas.050074497
- Zak J. Stark ladder in solids? Phys. Rev. Lett. 1968;20. Article No. 1477. doi: 10.1103/PhysRevLett.20.1477
- Kittel C. Quantum Theory of Solids. Wiley, New York, 1987.
- Astakhova T.Yu., Vinogradov G.A., Kashin V.A. Effect of External Factors on Physical and Chemical Transformations Polaron in an Electric Field as a Generator of Coherent Lattice Vibrations. Russian Journal of Physical Chemistry B. 2019;12:977–986. doi: 10.1134/S1990793118050147
- Lakhno V.D., Korshunova A.N. The modelling of selftrapped state formation in homogeneous polynucleotide chain. Russian Journal Nonlinear Dynamics. 2008;4(2):193–214. doi: 10.20537/nd0802007
- Zhang Y.L., Liu X.J., An Z. Temperature dependence of polaron stability in conjugated polymers. Europhys. Lett. 2015;111. Article No. 17009. doi: 10.1209/0295-5075/111/17009
- da Cuna W.F., de Oliveira Neto P.H., Gargano R., e Silva G.M. Temperature Effects on Polaron Stability in Polyacetylene. Int. J. Quant. Chem. 2008;108:2448–2453. doi: 10.1002/qua.21798
- Likhachev V.N., Astakhova T.Y., Vinogradov G.A. “Electron ping-pong” on a one-dimensional lattice: Wave packet motion up to the first reflection. Theor. Math. Phys. 2013;175(2):681–698. doi: 10.1007/s11232-013-0054-9
- Likhachev V.N., Astakhova T.Y., Vinogradov G.A. “Electron ping-pong” on a one-dimensional lattice: Multiple reflections of the wave packet and capture of the wave function by an acceptor. Theor. Math. Phys. 2013;176(2):1087–1099. doi: 10.1007/s11232-013-0090-5
- Fialko N.S., Lakhno V.D. Long-range charge transfer in DNA. Regular & Chaotic Dynamics. 2002;7(3):299–313 doi: 10.1070/RD2002v007n03ABEH000212
- Berlin Y.A., Grozema F.C., Siebbeles L.D.A., Ratner M.A. Charge Transfer in Donor-Bridge-Acceptor Systems: Static Disorder, Dynamic Fluctuations, and Complex Kinetics. J. Phys. Chem. 2008;112. doi: 10.1021/jp801646g
|
|
|