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Том 20   Выпуск 2   Год 2025
Список литературы

  1. Halverson L.J., Clayton M.K., Handelsman J. Variable stability of antibiotic-resistance markers in Bacillus cereus UW85 in the soybean rhizosphere in the field. Mol. Ecol. 1993;2(2):65-78. doi: 10.1111/j.1365-294X.1993.tb00001.x
  2. Jensen G.B., Hansen B.M., Eilenberg J., Mahillon J. The hidden lifestyles of Bacillus cereus and relatives. Environ. Microbiol. 2003;5(8):631-640. doi: 10.1046/j.1462-2920.2003.00461.x
  3. Vilain S., Luo Y., Hildreth M.B., Brözel V.S. Analysis of the life cycle of the soil saprophyte Bacillus cereus in liquid soil extract and in soil. Appl. Environ. Microbiol. 2006;72(7):4970-4977. doi: 10.1128/AEM.03076-05
  4. Oren A., Arahal D.R., Göker M., Moore E.R.B., Rossello-Mora R., Sutcliffe I.C. International Code of Nomenclature of Prokaryotes. Prokaryotic Code (2022 Revision). Int. J. Syst. Evol. Microbiol. 2023;73(5a). doi: 10.1099/ijsem.0.005585
  5. Ceuppens S., Boon N., Uyttendaele M. Diversity of Bacillus cereus group strains is reflected in their broad range of pathogenicity and diverse ecological lifestyles. FEMS Microbiol. Ecol. 2013;84(3):433-450. doi: 10.1111/1574-6941.12110
  6. Ehling-Schulz M., Lereclus D., Koehler T.M. The Bacillus cereus Group: Bacillus Species with Pathogenic Potential. Microbiol. Spectr. 2019;7(3). doi: 10.1128/microbiolspec.GPP3-0032-2018
  7. Stenfors Arnesen L.P., Fagerlund A., Granum P.E. From soil to gut: Bacillus cereus and its food poisoning toxins. FEMS Microbiol. Rev. 2008;32(4):579-606. doi: 10.1111/j.1574-6976.2008.00112.x
  8. European Food Safety Authority and European Centre for Disease Prevention and Control (EFSA and ECDC). The European Union one health 2022 zoonoses report. EFSA Journal. 2023;21(12):e8442. doi: 10.2903/j.efsa.2023.8442
  9. Jacobs B., Bogaerts B., Verhaegen M., Vanneste K., De Keersmaecker S.C.J., Roosens N.H.C., Rajkovic A., Mahillon J., Van Nieuwenhuysen T., Van Hoorde K. Whole-genome sequencing of soil- and foodborne Bacillus cereus sensu lato indicates no clear association between their virulence repertoire, genomic diversity and food matrix. Int. J. Food Microbiol. 2025;2(439):111266. doi: 10.1016/j.ijfoodmicro.2025.111266
  10. Jovanovic J., Ornelis V.F.M., Madder A., Rajkovic A. Bacillus cereus food intoxication and toxicoinfection. Compr. Rev. Food Sci. Food Saf. 2021;20(4):3719-3761. doi: 10.1111/1541-4337.12785
  11. Ramarao N., Sanchis V. The pore-forming haemolysins of bacillus cereus: a review. Toxins (Basel). 2013;5(6):1119-1139. doi: 10.3390/toxins5061119
  12. Duport C., Jobin M., Schmitt P. Adaptation in Bacillus cereus: From Stress to Disease. Front. Microbiol. 2016;7:1550. doi: 10.3389/fmicb.2016.01550
  13. Cadot C., Tran S.L., Vignaud M.L., De Buyser M.L., Kolstø A.B., Brisabois A., Nguyen-Thé C., Lereclus D., Guinebretière M.H., Ramarao N. InhA1, NprA, and HlyII as candidates for markers to differentiate pathogenic from nonpathogenic Bacillus cereus strains. J. Clin. Microbiol. 2010;48(4):1358-1365. doi: 10.1128/JCM.02123-09
  14. Baida G., Budarina Z.I., Kuzmin N.P., Solonin A.S. Complete nucleotide sequence and molecular characterization of hemolysin II gene from Bacillus cereus. FEMS Microbiol. Lett. 1999;180(1):7-14. doi: 10.1111/j.1574-6968.1999.tb08771.x
  15. Miles G., Bayley H., Cheley S. Properties of Bacillus cereus hemolysin II: a heptameric transmembrane pore. Protein Sci. 2002;11(7):1813-1824. doi: 10.1110/ps.0204002
  16. Kholodkov O.A., Budarina Zh., Kovalevskaya J.I., Si'unov A.V., Solonin A. Effect of Bacillus cereus hemolysin II on hepatocyte cells. Prikl. Biokhim. Mikrobiol. 2015;51(2):258-267. Russian. doi: 10.7868/S0555109915020099
  17. Kataev A.A., Andreeva-Kovalevskaya Z.I., Solonin A.S., Ternovsky V.I. Bacillus cereus can attack the cell membranes of the alga Chara corallina by means of HlyII. Biochim. Biophys. Acta. 2012;1818(5):1235-1241. doi: 10.1016/j.bbamem.2012.01.010
  18. Budarina Z.I., Nikitin D.V., Zenkin N., Zakharova M., Semenova E., Shlyapnikov M.G., Rodikova E.A., Masyukova S., Ogarkov O., Baida G.E., Solonin A.S., Severinov K. A new Bacillus cereus DNA-binding protein, HlyIIR, negatively regulates expression of B. cereus haemolysin II. Microbiology. 2004;150(11):3691-3701. doi: 10.1099/mic.0.27142-0
  19. Kovalevskiy O.V., Lebedev A.A., Surin A.K., Solonin A.S., Antson A.A. Crystal structure of Bacillus cereus HlyIIR, a transcriptional regulator of the gene for pore-forming toxin hemolysin II. J. Mol. Biol. 2007;365(3):825-834. doi: 10.1016/j.jmb.2006.10.074
  20. Rodikova E.A., Kovalevskiy O.V., Mayorov S.G., Budarina Z.I., Marchenkov V.V., Melnik B.S., Leech A.P., Nikitin D.V., Shlyapnikov M.G., Solonin A.S. Two HlyIIR dimers bind to a long perfect inverted repeat in the operator of the hemolysin II gene from Bacillus cereus. FEBS Lett. 2007;581(6):1190-1196. doi: 10.1016/j.febslet.2007.02.035
  21. Steingard C.H., Helmann J.D. Meddling with Metal Sensors: Fur-Family Proteins as Signaling Hubs. J. Bacteriol. 2023;205(4):e0002223. doi: 10.1128/jb.00022-23
  22. Harvie D.R., Vílchez S., Steggles J.R., Ellar D.J. Bacillus cereus Fur regulates iron metabolism and is required for full virulence. Microbiology. 2005;151(2):569-577. doi: 10.1099/mic.0.27744-0
  23. Clair G., Lorphelin A., Armengaud J., Duport C. OhrRA functions as a redox-responsive system controlling toxinogenesis in Bacillus cereus. J. Proteomics. 2013;94:527-539. doi: 10.1016/j.jprot.2013.10.024
  24. Clair G., Armengaud J., Duport C. Restricting fermentative potential by proteome remodeling: an adaptive strategy evidenced in Bacillus cereus. Mol. Cell Proteomics. 2012;11(6):M111.013102. doi: 10.1074/mcp.M111.013102
  25. Esbelin J., Armengaud J., Zigha A., Duport C. ResDE-dependent regulation of enterotoxin gene expression in Bacillus cereus: evidence for multiple modes of binding for ResD and interaction with Fnr. J. Bacteriol. 2009;191(13):4419-4426. doi: 10.1128/JB.00321-09
  26. Esbelin J., Jouanneau Y., Duport C. Bacillus cereus Fnr binds a [4Fe-4S] cluster and forms a ternary complex with ResD and PlcR. BMC Microbiol. 2012;12:125. doi: 10.1186/1471-2180-12-125
  27. Wattam A.R., Davis J.J., Assaf R., Boisvert S., Brettin T., Bun C., Conrad N., Dietrich E.M., Disz T., Gabbard J.L., Gerdes S., Henry C.S., Kenyon R.W., Machi D., Mao C., Nordberg E.K., Olsen G.J., Murphy-Olson D.E., Olson R., Overbeek R., Parrello B., Pusch G.D., Shukla M., Vonstein V., Warren A., Xia F., Yoo H., Stevens R.L. Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center. Nucleic Acids Res. 2017;45(D1):D535-D542. doi: 10.1093/nar/gkw1017
  28. Olson R.D., Assaf R., Brettin T., Conrad N., Cucinell C., Davis J.J., Dempsey D.M., Dickerman A., Dietrich E.M., Kenyon R.W., Kuscuoglu M., Lefkowitz E.J., Lu J., Machi D., Macken C., Mao C., Niewiadomska A., Nguyen M., Olsen G.J., Overbeek J.C., Parrello B., Parrello V., Porter J.S., Pusch G.D., Shukla M., Singh I., Stewart L., Tan G., Thomas C., VanOeffelen M., Vonstein V., Wallace Z.S., Warren A.S., Wattam A.R., Xia F., Yoo H., Zhang Y., Zmasek C.M., Scheuermann R.H., Stevens R.L. Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR. Nucleic Acids Res. 2023;51(D1):D678-D689. doi: 10.1093/nar/gkac1003
  29. Nagel A.S., Vetrova O.S, Rudenko N.V., Surin A.K., Karatovskaya A.P., Zamyatina A.V., Egorova N.A, Siunov A.V., Andreeva-Kovalevskaya Zh.I., Brovko F.A., Solonin A.S. Truncated Hemolysin II and Cytotoxin K2 Forms of Bacillus cereus. Russian Journal of Bioorganic Chemistry. 2024;50(5):1800-1806. doi: 10.1134/S1068162024050054
  30. Goujon M., McWilliam H., Li W., Valentin F., Squizzato S., Paern J., Lopez R. A new bioinformatics analysis tools framework at EMBL–EBI. Nucleic Acids Research. 2010;38(2):W695-W699, doi: 10.1093/nar/gkq313
  31. Crooks G.E., Hon G., Chandonia J.M., Brenner S.E. WebLogo: a sequence logo generator. Genome Res. 2004;14(6):1188-1190. doi: 10.1101/gr.849004
  32. Nagel A.S., Mayorov S.G., Andreeva-Kovalevskaya Z.I., Siunov A.V., Ivanova T.D., Shlyapnikov M.G., Solonin A.S. Structural Features of the HlyIIR Operator of Bacillus cereus Sensu Lato. Russ. J. Genet. 2025;61:910-916. doi: 10.1134/S1022795425700449
  33. Galaxy. https://usegalaxy.org/ (accessed 12.03.2025).
  34. Cock P.J.A., Antao T., Chang J.T., Chapman B.A., Cox C.J., Dalke A., Friedberg I., Hamelryck T., Kauff F., Wilczynski B., de Hoon M.J.L. Biopython: freely available Python tools for computational molecular biology and bioinformatics. Bioinformatics. 2009;25(11):1422-1423. doi: 10.1093/bioinformatics/btp163
Содержание
Оригинальная статья
Nagel A.S., Egorova N.A., Kulbaev I.S., Siunov A.V., Andreeva-Kovalevskaya Zh.I., Solonin A.S. Distribution of hlyII and hlyIIR Genes among Bacillus cereus sensu lato. Маthematical biology and bioinformatics. 2025;20(2):458-466. doi: 10.17537/2025.20.458
(опубликована на англ. яз.)

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