Мацкевич Виктор Александрович, Орлова Надежда Александровна, Воробьев Иван Иванович, Юрьев Андрей Серафимович, Воробьев Андрей Иванович
Поиск низкомолекулярного лиганда для афинной хроматографической очистки фактора свёртывания крови VIII человека молекулярным докингом in silico
Математическая биология и биоинформатика. 2011;6(1):14-22.
doi: 10.17537/2011.6.14.
Список литературы
- Koborova ON, Filimonov DA, Zakharov AV, Lagunin AA, Ivanov SM, Kel A, Poroikov VV. In silico method for identification of promising anticancer drug targets. SAR and QSAR Environmental Research. 2009;20:755-766. doi: 10.1080/10629360903438628
- Lagunin A, Filimonov DA, Poroikov VV. Multi-targeted natural products evaluation based on biological activity prediction with PASS. Current Pharmaceutical Design. 2010;16:1703-1717. doi: 10.2174/138161210791164063
- Zoete V, Grosdidier A, Michielin OJ. Docking, virtual high throughput screening and in silico fragment-based drug design. Cellular and Molecular Medicine. 2009;13:238-248. doi: 10.1111/j.1582-4934.2008.00665.x
- Larson P, Zhang C, Gorina E, Burmeister Getz E. IgG formation to mammalian proteins in hemophilia A patients following treatment with a new recombinant human factor VIII. Journal of Thrombosis and Haemostasis. 2004;2:1011-1012. doi: 10.1111/j.1538-7836.2004.00727.x
- Perugini M, Varelias A, Sadlon T, D’Andrea RJ. Hematopoietic growth factor mimetics: From concept to clinic. Cytokine & Growth Factor Reviews. 2009;20:87-94. doi: 10.1016/j.cytogfr.2009.01.002
- Morrill P, Gupta G, Sproule K, Winzor D, Christensen J, Mollerup I, Lowe C. Rational combinatorial chemistry-based selection, synthesis and evaluation of an affinity adsorbent for recombinant human clotting factor VII. Journal of Chromatography B. 2002;774:1-15. doi: 10.1016/S1570-0232(02)00103-4
- Schrödinger Маestro, version 9.0. Available at: https://www.schrodinger.com/productsguide/ (accessed 29 December 2010).
- Guha R, Howard MT, Hutchison GR, Murray-Rust P, Rzepa H, Steinbeck C, Wegner J K, Willighagen E. The Blue Obelisk Interoperability in Chemical Informatics. Journal of Chememical Information and Modeling. 2006;46:991-998. doi: 10.1021/ci050400b
- Notepad++. Available at: http://notepad-plus-plus.org/home (accessed 22 December 2010).
- Schrödinger LigPrep, version 2.3. Available at: https://www.schrodinger.com/productsguide/ (accessed 29 December 2010).
- Shen BW, Spiegel PC, Chang CH, Huh JW, Lee JS, Kim J, Kim YH, Stoddard BL. The tertiary structure and domain organization of coagulation factor VIII. Blood. 2008;111:1240-1247. doi: 10.1182/blood-2007-08-109918
- Knor S, Khrenov A, Laufer B, Benhida A, Grailly SC, Schwaab R, Oldenburg J, Beaufort N, Magdolen V, Saint-Remy JM, Saenko EL, Hauser CA, Kessler H. Efficient factor VIII affinity purification using a small synthetic ligand. Journal of Thrombosis and Haemostasis. 2008;6:470-477. doi: 10.1111/j.1538-7836.2008.02893.x
- eMolecules. Available at: http:www.emolecules.com (accessed 22 December 2010).
- Schrödinger SitеMap, version 2.3. Available at: https://www.schrodinger.com/productsguide/ (accessed 29 December 2010).
- Ngo JC, Huang M, Roth DA, Furie BC, Furie B. Crystal structure of human factor VIII: implications for the formation of the factor IXa-factor VIIIa complex. Structure. 2008;16:597-606. doi: 10.1016/j.str.2008.03.001
- Schrödinger Glide, version 5.5. Available at: https://www.schrodinger.com/productsguide/ (accessed 29 December 2010).
- Irwin JJ, Shoichet BK. ZINC – a free database of commercially available compounds for virtual screening. Journal of Chemical Information and Modeling. 2005;45:177-182. doi: 10.1021/ci049714+
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