Russian version English version
Volume 10   Issue 1   Year 2015
Likhoshvai V.A., Khlebodarova T.M.

On the Types of Bacterial Growth Laws

Mathematical Biology & Bioinformatics. 2015;10(1):154-163.

doi: 10.17537/2015.10.154.

References

  1. Likhoshvai V.A., Khlebodarova T.M. Mathematical modeling of bacterial cell cycle: The problem of coordinating genome replication with cell growth. J. Bioinform. Comput. Biol. 2014;12(3):1450009. doi: 10.1142/S0219720014500097
  2. Pritchard R.H., Barth P.T., Collins J. Control of DNA synthesis in bacteria. In: Microbial Growth, Symposium of Society of General Microbiology. 1969;19:263-297.
  3. Donachie W.D. Relationship between cell size and time of initiation of DNA replication. Nature. 1968;219(5158):1077-1079. doi: 10.1038/2191077a0
  4. Cooper S., Helmstetter C.E. Chromosome Replication and the Division Cycle of Escherichia coli B/r. J. Mol. Biol. 1968;31:519-540. doi: 10.1016/0022-2836(68)90425-7
  5. Kaguni J.M. DnaA: controlling the initiation of bacterial DNA replication and more. Annu. Rev. Microbiol. 2006;60:351-375. doi: 10.1146/annurev.micro.60.080805.142111
  6. Khlebodarova T.M., Likhoshvai V.A. New evidence of an old problem: the coupling of genome replication to cell growth in bacteria. Russ. J. Genet. 2014;50(9):891-901. doi: 10.1134/S102279541408002X
  7. Michelsen O., Teixeira de Mattos M.J., Jensen P.R., Hansen F.G. Precise determinations of C and D periods by flow cytometry in Escherichia coli K-12 and B/r. Microbiology. 2003;149:1001-1010. doi: 10.1099/mic.0.26058-0
  8. Zaritsky A., Vischer N., Rabinovitch A. Changes of initiation mass and cell dimensions by the 'eclipse'. Mol Microbiol. 2007;63:15-21. doi: 10.1111/j.1365-2958.2006.05501.x
  9. Zaritsky A., Wang P., Vischer N.O. Instructive simulation of the bacterial cell division cycle. Microbiology. 2011;157:1876-1885. doi: 10.1099/mic.0.049403-0
  10. Grant M.A., Saggioro C., Ferrari U., Bassetti B., Sclavi B., Cosentino Lagomarsino M. DnaA and the timing of chromosome replication in Escherichia coli as a function of growth rate. BMC Syst Biol. 2011;5:201. doi: 10.1186/1752-0509-5-201
  11. Donachie W.D., Blakely G.W. Coupling the initiation of chromosome replication to cell size in Escherichia coli. Curr. Opin. Microbiol. 2003;6:146-150. doi: 10.1016/S1369-5274(03)00026-2
  12. Hill N.S., Kadoya R., Chattoraj D.K., Levin P.A. Cell size and the initiation of DNA replication in bacteria. PLoS Genet. 2012;8:e1002549. doi: 10.1371/journal.pgen.1002549
  13. Zhang Q., Shi H. Coupling chromosomal replication to cell growth by the initiator protein DnaA in Escherichia coli. J. Theor. Biol. 2012;314:64-172. doi: 10.1016/j.jtbi.2012.08.045
  14. Likhoshvai V.A., Khlebodarova T.M. Coordination of cell growth and DNA replication: a mathematical model. Mathematical Biology and Bioinformatics. 2013;8(1):66-92 (in Russ.). doi: 10.17537/2013.8.66
  15. Hoffman H., Frank M.E. Time-lapse photomicrography of cell growth and division in Escherichia coli. J. Bacteriol. 1965;89:212-216.
  16. Ecker R.E., Kokaisl G. Synthesis of protein, ribonucleic acid, and ribosomes by individual bacterial cells in balanced growth. J. Bacteriol. 1969;98:1219-1226.
  17. Ward C.B., Glaser D.A. Correlation between rate of cell growth and rate of DNA synthesis in Escherichia coli B-r. Proc. Natl. Acad. Sci. USA. 1971;68:1061-1064. doi: 10.1073/pnas.68.5.1061
  18. Cullum J., Vicente M. Cell growth and length distribution in Escherichia coli. J. Bacteriol. 1978;134:330-337.
  19. Kubitschek H.E. Increase in cell mass during the division cycle of Escherichia coli B/rA. J. Bacteriol. 1986;168:613-618.
  20. Kubitschek H.E: Bilinear cell growth of Escherichia coli. J. Bacteriol. 1981;148:730-733.
  21. Cooper S. Leucine uptake and protein synthesis are exponential during the division cycle of Escherichia coli B/r. J. Bacteriol. 1988;170:436-438.
  22. Grover N.B., Woldringh C.L. Dimensional regulation of cell-cycle events in Escherichia coli during steady-state growth. Microbiology. 2001;147:171-181.
  23. Reshes G., Vanounou S., Fishov I., Feingold M. Cell shape dynamics in Escherichia coli. Biophys. J. 2008;94:251-264. doi: 10.1529/biophysj.107.104398
  24. Godin M., Delgado F.F., Son S., Grover W.H., Bryan A.K., Tzur A., Jorgensen P., Payer K., Grossman A.D., Kirschner M.W., Manalis S.R. Using buoyant mass to measure the growth of single cells. Nat. Methods. 2010;7:387-390. doi: 10.1038/nmeth.1452
  25. Mir M., Wang Z., Shen Z., Bednarz M., Bashir R., Golding I., Prasanth S.G., Popescu G. Optical measurement of cycle-dependent cell growth. Proc. Natl. Acad. Sci. USA. 2011;108:3124-13129. doi: 10.1073/pnas.1100506108
  26. Campos M., Surovtsev I.V., Kato S., Paintdakhi A., Beltran B., Ebmeier S.E., Jacobs-Wagner C. A constant size extension drives bacterial cell size homeostasis. Cell. 2014;159:433-1446. doi: 10.1016/j.cell.2014.11.022
  27. Osella M., Nugent E., Cosentino Lagomarsino M. Concerted control of Escherichia coli cell division. Proc. Natl. Acad. Sci. USA. 2014;111:3431-3435. doi: 10.1073/pnas.1313715111
  28. Robert L., Hoffmann M., Krell N., Aymerich S., Robert J., Doumic M. Division in Escherichia coli is triggered by a size-sensing rather than a timing mechanism. BMC Biol. 2014;12:17. doi: 10.1186/1741-7007-12-17
  29. Cooper S. Distinguishing between linear and exponential cell growth during the division cycle: Single-cell studies, cell-culture studies, and the object of cell-cycle research. Theor. Biol. Med. Model. 2006;3:10. doi: 10.1186/1742-4682-3-10
Table of Contents Original Article
Math. Biol. Bioinf.
2015;10(1):154-163
doi: 10.17537/2015.10.154
published in Russian

Abstract (rus.)
Abstract (eng.)
Full text (rus., pdf)
References Translation into English
Math. Biol. Bioinf.
2015;10(Suppl.):t20-t28
doi: 10.17537/2015.10.t20

Full text (eng., pdf)

 

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